bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2947_orf2 Length=107 Score E Sequences producing significant alignments: (Bits) Value 272620.KPN_02180 79.7 2e-14 > 272620.KPN_02180 Length=622 Score = 79.7 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 3/92 (3%) Query 14 REVPS-ALCGLLRMREFTQDDGHILCRMSQVLAEVTAFLLACQKLYKAVGFCKGEIVYHI 72 R PS AL GL+R+R FTQDD HI C QV EV A + +Y GF K IV + Sbjct 343 RNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEK--IVVKL 400 Query 73 STRPKGSQGSEQEWARAEGLLRSALEQLDIPF 104 STRP+ GS++ W RAE L ALE+ +IPF Sbjct 401 STRPEKRIGSDETWDRAEADLAVALEENNIPF 432 Lambda K H 0.326 0.139 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22528463995 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40