bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2928_orf1 Length=89 Score E Sequences producing significant alignments: (Bits) Value 8090.ENSORLP00000003876 93.6 1e-18 > 8090.ENSORLP00000003876 Length=972 Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 0/76 (0%) Query 1 VLIGGCDLSVKKTSTITSLENNVEVEIFRPLSFYTSPVLKVACEPLQPSELPKMIEGLRR 60 VLI GCD + KT+TIT N E +IFRPL F T+ V+K+A EP+ PSELPKM++GLR+ Sbjct 550 VLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELPKMLDGLRK 609 Query 61 IDKAYPIAQMKVEESG 76 ++K+YP KVEESG Sbjct 610 VNKSYPSLTTKVEESG 625 Lambda K H 0.317 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23068210110 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40