bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2923_orf1 Length=142 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0430w 192 2e-48 > 5833.PFE0430w Length=1490 Score = 192 bits (488), Expect = 2e-48, Method: Composition-based stats. Identities = 86/140 (61%), Positives = 113/140 (80%), Gaps = 0/140 (0%) Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60 Q+VE+++E +K +RLL+LLG+W YG ++IFVNKQIEAD L+ EL KY Y LVLHGGQD Sbjct 946 QFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQD 1005 Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120 QTDR+FT+++FK +LIATSV ARG+D+ +++LVIN+ CP HIEDY+HRIGRTGR+ Sbjct 1006 QTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIGRTGRSN 1065 Query 121 NIGVSYTFITPQEADKAEEL 140 NIG +YTFI P E KA ++ Sbjct 1066 NIGYAYTFILPNEYTKAYDI 1085 Lambda K H 0.321 0.140 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22741008115 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40