bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2841_orf2 Length=133 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P2.4 89.0 3e-17 > 5833.MAL3P2.4 Length=593 Score = 89.0 bits (219), Expect = 3e-17, Method: Composition-based stats. Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 9/104 (8%) Query 29 FLEKGWLQVVECRRMLKWSYAFAFFAEFPETRQKHLFEFHQGQLERSLDLLQERLETF-- 86 F E +Q+++CR++LKWSY +A+F+ + QKHLFE+HQG+LE++LD+LQ + E Sbjct 496 FFEDAIIQIIKCRKILKWSYTYAYFSNWKSDNQKHLFEYHQGELEKNLDILQTKTEDINL 555 Query 87 -EPKAYIDRDPADLITFKMQLLDLTAVVRGFFAKICDVFEDEFV 129 + K D D I Q++D+ FF IC+ E+ FV Sbjct 556 TQFKNNTDNDTVRDIQQITQMIDI------FFKNICEFMENNFV 593 Lambda K H 0.324 0.140 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22766716098 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40