bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_2778_orf1
Length=77
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_2520 96.3 3e-19
> 5807.cgd8_2520
Length=1280
Score = 96.3 bits (238), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/70 (58%), Positives = 57/70 (81%), Gaps = 0/70 (0%)
Query 8 WAQGQSFAALIRSTSLYEGTVIRCMRRLEELLRQLASAAKAIGNQELEAKCVAAVRQLRR 67
W++G+SFA+++ +TS YEG+VIRC+RRLEELLRQ+ASA K+IGN +LE K + +RR
Sbjct 1211 WSKGESFASILENTSFYEGSVIRCLRRLEELLRQVASATKSIGNDDLEKKLKEGIALIRR 1270
Query 68 GSIFSSSLYL 77
G +F+ SLYL
Sbjct 1271 GIVFTPSLYL 1280
Lambda K H
0.323 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23091434817
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40