bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2735_orf1 Length=87 Score E Sequences producing significant alignments: (Bits) Value 44689.DDBDRAFT_0185667 80.5 2e-14 > 44689.DDBDRAFT_0185667 Length=434 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 1/84 (1%) Query 4 RLEKVRDLMLFRHGSTGIAEALRIAVEVLGQRIAGYPVKSLQLTATDKKGRGPFIECLLV 63 RLEK+RDL+LFR+GSTGI A++ AVE L + I YPVK+L+ + DK G +C+LV Sbjct 308 RLEKLRDLVLFRYGSTGIQTAIKEAVE-LKKFIPVYPVKNLKSLSCDKSGGSILRDCMLV 366 Query 64 KKGTTIGDFASLLHPAIGRNFISA 87 +GT + +FA +LHP + + ++ A Sbjct 367 PQGTQVREFAGMLHPDLDKYYLYA 390 Lambda K H 0.325 0.142 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22371284777 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40