bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2640_orf1 Length=172 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0129 276 2e-73 > 5833.PF08_0129 Length=604 Score = 276 bits (705), Expect = 2e-73, Method: Composition-based stats. Identities = 115/172 (66%), Positives = 146/172 (84%), Gaps = 5/172 (2%) Query 1 DRGSFSVEVLLLLFALKLNYPSRVWLLRGNHECRQMTSFFNFRDECESKYDMAVYYAFME 60 DRGSFS+EVLLLL+ALK+N+P R+WL+RGNHECRQMT+FFNFRDECE KYD+ VYYAFME Sbjct 118 DRGSFSIEVLLLLYALKINFPDRIWLIRGNHECRQMTTFFNFRDECEYKYDIVVYYAFME 177 Query 61 AFDALPLAAVINGKFLALHGGLSPELKALSQIGGINRFQEPPRGGLFCDLLWADPLDEAR 120 +FD +PL+AVINGKFL +HGGLSP+L L+QI RFQEPPR G+FCD+LW+DP+DE + Sbjct 178 SFDTIPLSAVINGKFLGVHGGLSPDLILLNQICSFTRFQEPPRSGIFCDILWSDPIDEDK 237 Query 121 EDAEAQLAQSTDGAFIPNDVRGCSFFYAYSAVSTFLDRNGLLSVLRAHEAQL 172 E+ Q ++ PND+RGCS+F+ Y+A +TFL++NGLLS++RAHEAQL Sbjct 238 EEHTIQTE-----SYFPNDIRGCSYFFGYNAATTFLEKNGLLSIIRAHEAQL 284 Lambda K H 0.325 0.140 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 32857020181 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40