bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2637_orf1 Length=128 Score E Sequences producing significant alignments: (Bits) Value 5141.NCU01187.1 75.1 5e-13 > 5141.NCU01187.1 Length=1646 Score = 75.1 bits (183), Expect = 5e-13, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 18/132 (13%) Query 6 VFVQMEYYE-LALQRLTKEGRTLKIADVRRLFMQLLEAIVCVHRAGACHRALHPSNVFLV 64 +++ MEY E L+ L + + A++ RLF Q+LE + +H HR L P N+F+ Sbjct 778 MYISMEYCEKRTLRDLISRNLSKETAEIWRLFRQILEGLCHIHSLNIVHRDLKPENIFIS 837 Query 65 EGSEGLI-MKVGDFGLRQLVPLPPDSPFAS--------------FVAPEVHKG--HPFTD 107 G +GL +K+GDFGL L D AS +VAPEV G +T Sbjct 838 SGPDGLDNVKIGDFGLATSGQLAIDRSTASLDASDMTRSIGTAVYVAPEVRTGGSGSYTS 897 Query 108 KADMYSIGMLFL 119 K DMYS+G++F Sbjct 898 KVDMYSLGVIFF 909 Lambda K H 0.328 0.143 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22424899233 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40