bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2594_orf2 Length=165 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0530 147 9e-35 > 5833.PF14_0530 Length=1904 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 63/139 (45%), Positives = 97/139 (69%), Gaps = 1/139 (0%) Query 28 ETVDAVLRCTMDCTKYQGSQPLLQSTDVHYYSKTGAAVFNRRVVYSRVAAPVNSCILQIS 87 +T+D + +DC Y G P +QSTDVHY KTG A+FN R+VY + P+N+C LQ++ Sbjct 1703 KTMDLTVTSELDCITYNGKNPTMQSTDVHYNCKTGTAIFNWRIVYPNITHPLNTCFLQLA 1762 Query 88 AYDFRNIGESPFIGEVNLEVRKYLERVAQTMASIEVDAELRLQNRAHESLDVQTF-GYVQ 146 AY+ N+G S F+GEVNLE+ KY+++ +Q + E+DAEL+L+ + + T+ GY+Q Sbjct 1763 AYNNNNVGVSEFLGEVNLELSKYIQKASQILNKFELDAELKLRKKTDTDHNKNTYNGYIQ 1822 Query 147 VTLQFMAQSEATSRPVGMG 165 VT+QF+ Q++A +PVG+G Sbjct 1823 VTVQFIPQNKANIKPVGLG 1841 Lambda K H 0.321 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29254071491 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40