bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2492_orf1 Length=150 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0860c 270 1e-71 > 5833.PFI0860c Length=820 Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 122/149 (81%), Positives = 139/149 (93%), Gaps = 0/149 (0%) Query 2 GRKCVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRSRVESLLVSPISKASAQQRAGRA 61 GRKC+++TNIAETS+TIDGIVYV+DPGFSKQKVYNPR+R+ESLL++PISKASA+QRAGRA Sbjct 440 GRKCILATNIAETSITIDGIVYVIDPGFSKQKVYNPRARIESLLIAPISKASAEQRAGRA 499 Query 62 GRTRPGKCFRLYTEAAFQSELVDQTYAEILRSNLASVVLTLKKLGIDDLVHFDFMDPPAP 121 GRT+PGKCFRLYTE F+ L +QTY EILRSNL SVVL LKKLGIDDLVHFDFMDPPAP Sbjct 500 GRTKPGKCFRLYTEKCFEETLPEQTYPEILRSNLGSVVLNLKKLGIDDLVHFDFMDPPAP 559 Query 122 ETLMRALEQLNYLGALDNEGELTSEGESM 150 ETLMRALEQLNYLGALD+EG+LT++G M Sbjct 560 ETLMRALEQLNYLGALDDEGDLTNKGHLM 588 Lambda K H 0.316 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22764965652 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40