bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2460_orf1 Length=159 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI1625c 227 9e-59 > 5833.PFI1625c Length=484 Score = 227 bits (579), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 104/151 (68%), Positives = 127/151 (84%), Gaps = 0/151 (0%) Query 1 EHMVFKGTKRRSRVQLEKEIENMGAHLNAYTSREQTVYYAKGFKEDLGRCLDILSDILLN 60 EHM+FKGTK+R+R+QLEKEIENMGAHLNAYT+REQT YY K FK D+ C+++LSDIL N Sbjct 88 EHMIFKGTKKRNRIQLEKEIENMGAHLNAYTAREQTGYYCKCFKNDIKWCIELLSDILSN 147 Query 61 STIDKEALEIEKRVILREMKEVEKQTEEVIFDRLHMTAFRDSPLGFTILGSEDNIQNMRR 120 S D +E+EK VILREM+EVEK +EVIFD+LHMTAFRD PLGFTILG E+NI+NM+R Sbjct 148 SIFDDNLIELEKHVILREMEEVEKCKDEVIFDKLHMTAFRDHPLGFTILGPEENIKNMKR 207 Query 121 EDIIDYIERNYTGNRMVVAATGDVNHKAFVE 151 +DIIDYI +NYT +RMV+ A GDV H+ V+ Sbjct 208 KDIIDYINKNYTSDRMVLCAVGDVQHEEIVK 238 Lambda K H 0.318 0.135 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26246233818 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40