bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2346_orf1 Length=157 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P3.14 162 4e-39 > 5833.MAL3P3.14 Length=610 Score = 162 bits (409), Expect = 4e-39, Method: Composition-based stats. Identities = 79/147 (53%), Positives = 97/147 (65%), Gaps = 0/147 (0%) Query 11 LRQLCLARSKLIRHRGPDWNGIDVISYGGDRIHALAHERLSIVDPTSGKQPLNDPEGRVV 70 LR+ L SK++RHRGPDWNGI V + LAHERL+IVD SG QPL D E V Sbjct 17 LRRKALNLSKILRHRGPDWNGIVVEENDDGTTNVLAHERLAIVDVLSGHQPLYDDEEEVC 76 Query 71 CVANGEIYNHLQLRARLPEDEAIKLQTQSDCQVIPSLFKYFGRDFVSMLDGDFATIVVDR 130 NGEIYNHL+LR + E+ KL++ SDC VIP+LFK + SMLDG FA ++ D+ Sbjct 77 LTINGEIYNHLELRKLIKEENLNKLKSCSDCAVIPNLFKIYKEKIPSMLDGIFAGVISDK 136 Query 131 HTGDFLVARDPIGISPLYVGHSADGSI 157 F RDPIGI PLY+G++ADGSI Sbjct 137 KNNTFFAFRDPIGICPLYIGYAADGSI 163 Lambda K H 0.321 0.142 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 24996413160 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40