bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2314_orf2 Length=174 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd5_2340 100 2e-20 > 5807.cgd5_2340 Length=524 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%) Query 20 SLARIAQGLLVGGSSLGRGSGLGVYTCRPFSRRSVICEYSGILIDRRTALLLRHMECASH 79 SL+ + G+ S+LGR +GLG+++ R F + +I E+ G +IDR+ AL LR A+H Sbjct 275 SLSTLFDGVYTQRSTLGRSAGLGLFSDRHFRKNDIITEFVGWVIDRKEALRLRSEGKATH 334 Query 80 VVNVQMQHLYLLGFHTPFPLLGGGAFINDGRWNTRGGEGPGICVRFRVMFDKHRATQRVV 139 + ++ LYL G P P +GGG+F NDG + GPG RF +D+ RV Sbjct 335 ICDLVKPSLYLDGEKDPKPYIGGGSFANDG---SAFLGGPGNNSRFWKWYDEREGRSRVF 391 Query 140 VVAVKDIPKGTELLTSYDNDYW 161 + A +DI G E+ Y DYW Sbjct 392 LKATQDIQPGEEIFVGYCKDYW 413 Lambda K H 0.325 0.144 0.460 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34096907735 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40