bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2255_orf1 Length=74 Score E Sequences producing significant alignments: (Bits) Value 5085.AFUA_6G07840 93.2 2e-18 > 5085.AFUA_6G07840 Length=204 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 38/67 (56%), Positives = 54/67 (80%), Gaps = 0/67 (0%) Query 1 QKTDEEWRQILTREEYRVLREKATEPPWSGEYNSVYPSSGFFVCRGCLSPLFPASSKFKS 60 Q+++ EWR +L+ E++RVLREK TEPP++GEY+S + S G + C GC +PL+ A+ KFKS Sbjct 69 QRSEAEWRAVLSPEQFRVLREKGTEPPYTGEYDSHFSSKGVYTCAGCNAPLYKATHKFKS 128 Query 61 GCGWPAF 67 GCGWPA+ Sbjct 129 GCGWPAY 135 Lambda K H 0.317 0.135 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22434241900 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40