bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2205_orf1 Length=102 Score E Sequences producing significant alignments: (Bits) Value 10116.ENSRNOP00000041035 77.4 1e-13 > 10116.ENSRNOP00000041035 Length=270 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 0/87 (0%) Query 15 ASLADLEEIFNDSSSSNYLVVFARLTTASELKSREEHYQPFLEAADSVSSFCSREVEPMW 74 S+ADL FND S+S+YLVV+ RL T+ L+ + + ++ F+E +V FC +EVEPM Sbjct 152 TSVADLLASFNDQSTSHYLVVYLRLLTSGYLQRKSKFFEHFIEGGQTVKEFCQQEVEPMC 211 Query 75 VAANEPQIFALSSSLGVSVEVFYVDQS 101 ++ I AL+ +L VS++V Y+D+ Sbjct 212 KESDHIHIIALAQALSVSIQVEYMDRG 238 Lambda K H 0.311 0.124 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22913371775 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40