bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2189_orf1 Length=111 Score E Sequences producing significant alignments: (Bits) Value 5141.NCU06569.1 62.8 3e-09 > 5141.NCU06569.1 Length=805 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 12/86 (13%) Query 26 QIRQQLSSPNTETKLVGLRRAIAAEAAAACTYAPGEFGAEGGSSLFFADFLKNLSTTDFE 85 Q+++ L S N L GLRR I+ + T+ F+ +KN+++ + E Sbjct 39 QVKKLLDSRNEREVLDGLRRVISMMYRSQRTHP------------LFSSVVKNVASPNIE 86 Query 86 LKRLVYLYLVQHAHEQPDLALLSVNC 111 +K+LVY+YL+ HA E PDLALLS+N Sbjct 87 IKKLVYIYLIHHAEEDPDLALLSINT 112 Lambda K H 0.317 0.131 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23016794144 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40