bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_2181_orf1
Length=118
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0124 112 4e-24
> 5833.PF10_0124
Length=1438
Score = 112 bits (279), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 0/99 (0%)
Query 12 KLRPGVISFSREMSRYFELFLFTMGTATHAKTALRLLDPESLFFACRVFSRFDSVNGYKS 71
KLRPGVI F R MS +E++L+TMGT HAK+ L LLDP FF RVFSR D +N K
Sbjct 575 KLRPGVIEFLRTMSEKYEIYLYTMGTLEHAKSCLFLLDPLRKFFGNRVFSRKDCLNSLKH 634
Query 72 LLRIFPSESKLAVVADDIDAVWREQNKCIKIEGYFFFAD 110
L +I P+ +++ DD D +W+E + CIK+ GY +F D
Sbjct 635 LNKILPTYRSVSICIDDSDYIWKENSSCIKVHGYNYFPD 673
Lambda K H
0.327 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22460540320
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40