bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2152_orf1 Length=163 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd5_3140 184 1e-45 > 5807.cgd5_3140 Length=2069 Score = 184 bits (466), Expect = 1e-45, Method: Composition-based stats. Identities = 91/179 (50%), Positives = 112/179 (62%), Gaps = 17/179 (9%) Query 1 GVAPHVTELAAGLSRQGHEVHVFVRAMESCGGCSEHYGVMYHECTFDLDRDFVVEIQNMC 60 GV+PHV++L+A L R GHEVH+F RA S H GV+YHEC F L+ DFV EI NMC Sbjct 1248 GVSPHVSQLSASLVRLGHEVHLFTRATTSAYIIKVHDGVLYHECPFQLNSDFVTEIINMC 1307 Query 61 ESFIACMLSVEEAM--------------GTEFEICHAHDWLAGRALIRAKQMG---RTAI 103 SF+ M E+ + G F ICH HDWLA L +++G RT I Sbjct 1308 NSFVYYMQRWEDGLTKVPDHPMLNNVKNGYRFNICHCHDWLAAPVLTSLRRIGNNNRTTI 1367 Query 104 LTMHSTEFGRCGNNNYGGVSKRIRDIEAEACHLADRVICVSGVLAEEVRAQYGVHPAKM 162 LT+HSTE+GRCGN +YGG S RI DIE E H ADR+ICVSGV AEEV +G++ K+ Sbjct 1368 LTLHSTEYGRCGNQSYGGQSGRISDIEREGSHTADRLICVSGVFAEEVCRLFGINRNKI 1426 Lambda K H 0.324 0.136 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28009217385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40