bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2144_orf1 Length=101 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0900w 86.7 2e-16 > 5833.PFE0900w Length=268 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Query 5 AKNFWVPENTP----DELQAKPKTPQKGLCCPITGATLRIKQLVTVKPNLASKEDTENTR 60 + NFW+ NT D +Q K K P K L CPIT L++ +L+T+ P + D+EN Sbjct 133 SNNFWLSCNTSKVKKDTIQKKLKPPSKNLICPITKKPLKMNELITINPEVIKNGDSENGG 192 Query 61 WLCALSGREISHQKAAVVKTTGQVILLECLEKLVFGKRGAL 101 W+C+ S + I H KA ++K TG++IL E ++GK+ + Sbjct 193 WVCSFSKKNIDHHKAVLLKKTGKIILKSFFENFIYGKKNSY 233 Lambda K H 0.316 0.131 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22990353331 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40