bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2129_orf1 Length=136 Score E Sequences producing significant alignments: (Bits) Value 51511.ENSCSAVP00000017687 75.5 4e-13 > 51511.ENSCSAVP00000017687 Length=341 Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 2/99 (2%) Query 40 FMQQRMSAWEPLLTPRRILFVLFGVGLVFVVLGFVILLVNSGIVECKVNYTDMVGDLILK 99 F QQR+ AW P+L+ + L + F V + FV +G V+L+ + +VE + +YTD + + Sbjct 16 FKQQRLPAWAPILSAKSTLPIFFIVSIAFVPIGVVLLVTSEAVVEFQYDYTDCIINQSSM 75 Query 100 IDASTC--TDTSITEITGDVLLYYELSNYFQNHRHFMKS 136 TC T T + G+V YY L+N+FQNHR ++KS Sbjct 76 TQPCTCVINITLGTSMDGNVYAYYGLTNFFQNHRRYVKS 114 Lambda K H 0.329 0.144 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22513421946 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40