bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2115_orf1 Length=116 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_2770 108 4e-23 > 5807.cgd1_2770 Length=1281 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 4/117 (3%) Query 4 KIPPESMDAFSYQEVVLPGQILASVLKDALFAALIKLRTQYMMELR----QVKAAGHDPT 59 +I ES+D+F+YQE++ PG + +++ KDA+F+ L K+R+ Y++E+R + + Sbjct 373 EIREESIDSFAYQELLSPGNLYSALFKDAIFSFLQKIRSTYLIEIRSKSGEKNKESKNGV 432 Query 60 LVISSIKFFDAATERCASEIGHKINYFMATGNIRTTQLDLQQLSGWTVTADRLNLNR 116 ++ +F + + S I ++ YFMATGN++TTQLDLQQLSGWTV ADRLN NR Sbjct 433 NLLRDTAYFKSVLSKNISMIPKRLQYFMATGNVKTTQLDLQQLSGWTVVADRLNFNR 489 Lambda K H 0.323 0.134 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22619469984 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40