bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2114_orf1 Length=147 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000011955 90.5 1e-17 > 69293.ENSGACP00000011955 Length=395 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/128 (42%), Positives = 78/128 (60%), Gaps = 5/128 (3%) Query 1 GLKAVCLAASSVALGETPLALAVGVESLSNAPYLL-LRARQGGYKLGDGSLADSIVLEGL 59 GLKAVCL A S+ GE+ + +A G+ES+S AP+ L +RA G K+GD SL DS+V +GL Sbjct 93 GLKAVCLGAQSIQTGESSVVVAGGMESMSKAPHTLQMRA---GVKMGDASLQDSMVADGL 149 Query 60 RGFENQKPRGTRAEAAAVQLGISREECDKYAVQSFKRAADAASSGFFRLEGLLPFSTASL 119 + G AE A Q G+SREE D++AVQS +A A +G F E ++P + +S Sbjct 150 TDAFHGYHMGITAENVAKQWGVSREEQDRFAVQSQNKAEAAQEAGHFDHE-IVPVTVSSR 208 Query 120 DMPSQCAI 127 P + + Sbjct 209 KGPVEVKV 216 Lambda K H 0.318 0.132 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23033159460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40