bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2109_orf1 Length=149 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0045 166 2e-40 > 5833.PF08_0045 Length=1038 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 79/144 (54%), Positives = 99/144 (68%), Gaps = 3/144 (2%) Query 6 KSDIWGFYNKEYESSKTFVPAHQCQYAPQWKHLVTPDHPSPPRVTGVRLSALRELGRRIF 65 K++I+ FY + YE SK+FVP + +Y PQW+H+VTP SP R TGV L LG++IF Sbjct 562 KTEIFNFYEQVYEKSKSFVPTPKEKYLPQWEHMVTPQKFSPSRKTGVEKDVLINLGKKIF 621 Query 66 TIPEGFVPHATIAKIMKQRLAAAEGPEHEQTLDFGAAENLAYATLLSDGFHIRLAGQDAQ 125 T+ E F H I K+ K R+ + E + +DFG AE LAYATLLSDGFH RL+GQD+Q Sbjct 622 TLRENFTAHPIITKLFKSRI---DSLETGKNIDFGTAELLAYATLLSDGFHARLSGQDSQ 678 Query 126 RGTFSHRHAVLHDQAVEAQHCIFD 149 RGTFSHRHAVLHDQ + IFD Sbjct 679 RGTFSHRHAVLHDQITYESYNIFD 702 Lambda K H 0.321 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40