bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2100_orf1 Length=96 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0279 92.4 3e-18 > 5833.PF13_0279 Length=326 Score = 92.4 bits (228), Expect = 3e-18, Method: Composition-based stats. Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%) Query 5 LLQLLVFWFLPPPSLRPSVAAVSIHHKTNAGVCFCHHNPVDLCFICSCCLAIYCSETS-D 63 L Q ++FWFLP + R + ++ TN VC CH+ +D+ +ICSCCLAIYCSE + Sbjct 234 LTQTIIFWFLPSVNTRKYFSNTYLNEDTNIAVCTCHNKQIDIAYICSCCLAIYCSEKNLQ 293 Query 64 NGKERISCDVCKSRFAKGLLKAKLAASVDAS 94 K+R+SC +CK+RF K LL+ K + +D S Sbjct 294 TNKDRLSCAICKTRFTKSLLRNKHVSDLDFS 324 Lambda K H 0.327 0.138 0.462 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22546722150 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40