bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2091_orf1 Length=165 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0664 172 3e-42 > 5833.PF14_0664 Length=3336 Score = 172 bits (436), Expect = 3e-42, Method: Composition-based stats. Identities = 76/135 (56%), Positives = 111/135 (82%), Gaps = 0/135 (0%) Query 8 DNTKKIFILNAVIGEEGQHLGVENLRGSGKIAGETSRAYDEVFTLSIVSGRSVGIGAYVV 67 +N +K +I++A++G +GVENLRGSG IAGETS+AY+E+FTLS V+GRSVGIGAY+V Sbjct 2685 ENNEKRYIIDAIVGNLKNPVGVENLRGSGLIAGETSKAYEEIFTLSYVTGRSVGIGAYLV 2744 Query 68 RLAQRCIQQKNSPLVLTGFHALNKLLGRDVYISQEQLGGPEVMLPNGVTHLEVKSDKEAI 127 RL +R IQ+K S L+LTGF+ALNK+LG +VY+S EQLGG +M+ NG++ ++V+SD+E + Sbjct 2745 RLGKRTIQKKGSSLLLTGFNALNKILGENVYVSNEQLGGVNIMMRNGISQVQVESDQEGM 2804 Query 128 KEAVRWLEFVPPTAD 142 + ++WL +VP T++ Sbjct 2805 DKIIQWLSYVPRTSN 2819 Lambda K H 0.316 0.134 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29254071491 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40