bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2083_orf2 Length=132 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0328 113 2e-24 > 5833.PF10_0328 Length=488 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 2/98 (2%) Query 37 EALMGSWISCANALLSTLSKYEGGHIFEKPVDRKV--APGYYDVVSKPMSLSCVRMKLRK 94 +A W AN L+ +LSKYEGGHIFEK VD K P YYDV+ PMS SC++ KL+K Sbjct 330 DAFNKQWYLLANQLILSLSKYEGGHIFEKLVDAKKQNCPDYYDVIKNPMSFSCIKTKLKK 389 Query 95 QSYKHPHAFLADVQLIFDNCALYNRPGSWVYTIGKNLQ 132 Y +P F+ DVQLIFDNC+LYN S V GKN++ Sbjct 390 GQYAYPSEFVKDVQLIFDNCSLYNTSNSVVAITGKNIE 427 Lambda K H 0.319 0.132 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22851147482 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40