bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2077_orf1 Length=123 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.206 69.7 3e-11 > 5833.MAL13P1.206 Length=687 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 23/123 (18%) Query 1 RGFSMELGASWTVLVFSALGVPLSTTHCAVGSTVGVGLLEPKICSSSSCSSLNVYLSKDE 60 RGF++EL + VL FS G+PLS+THCAV S +G+GL+E K+ + + Sbjct 559 RGFTIELISGLVVLFFSICGIPLSSTHCAVSSVIGLGLVEAKMNADN------------- 605 Query 61 GHYNHQEQEEEREMKRNSIHQKRDNKNKLKHKFKLKFCKLFNCLNFSSVNWRLFGSMIVS 120 ++ + M ++ I +D L K K F+ LN S VN RLF ++ +S Sbjct 606 ------KRHARKSMDKDIIQVDKDKSFTLTEKIKYP----FSFLNTSCVNLRLFRTVFLS 655 Query 121 WVV 123 W++ Sbjct 656 WIL 658 Lambda K H 0.319 0.132 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22834639773 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40