bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1926_orf1
Length=111
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL0805w 62.0 5e-09
> 5833.PFL0805w
Length=1073
Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query 1 KLTLQPLEYLLPD-EHKENFKKAAQFYSDAVGMSKADLTAIAGKPLSIGEILRAGNQVTY 59
+ L P + + D + + +K A FY G+ +S+GE L Q Y
Sbjct 760 RTKLLPFSFFMDDNDMIQAYKDALIFYGLTYGLQLFGQEKYNHNIISVGEYLEKCTQKLY 819
Query 60 AGEPPGFAMCAPHERVLLGFALELNFLDENAIAARAGIKACVPGREKCVG 109
AG PPG C +L+GF++ LNF +++ GI C P +E C G
Sbjct 820 AGPPPGLLTCPIGTTILMGFSINLNFYKNKYLSSTNGITLCEPMKESCSG 869
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23016794144
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40