bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1900_orf1 Length=161 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1680w 177 7e-44 > 5833.PFL1680w Length=1329 Score = 177 bits (450), Expect = 7e-44, Method: Composition-based stats. Identities = 79/160 (49%), Positives = 121/160 (75%), Gaps = 0/160 (0%) Query 1 RAGEGKWGSCLRIVNPLLATTIEKLTYETDEAAISCCCCEFEGLPLLIVGTVTAMTLRPK 60 +AG+GKWGSC++I+NP+ ++K++ + +EAA+S C CE E L LIVGT T ++L+ K Sbjct 973 KAGQGKWGSCIKIINPVNLQILDKISLDMEEAALSVCACELEALHCLIVGTTTNLSLKTK 1032 Query 61 KMAAASIKVYAYDTNFRLTFLHSTPVEDVPQCFAAFRGMLLASVGNRLRLYALGKKRLLK 120 + +AS++VY YD ++L LH TP+E+ P CF ++ G L+AS+GN+LR+YALGKK+LLK Sbjct 1033 SLTSASLRVYTYDIQYKLNLLHITPIEEQPYCFCSYNGKLIASIGNKLRIYALGKKKLLK 1092 Query 121 KCEYKNLPSTLVFLRVSGDRIFAGDMCESIHVLKYNAAAN 160 KCEYK++P +V +++SG+RIFA D+ ES+ + Y+ N Sbjct 1093 KCEYKDIPEAIVSIKISGNRIFACDIRESVLIFFYDPNQN 1132 Lambda K H 0.325 0.138 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26764363279 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40