bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1864_orf1 Length=145 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1655c 75.1 5e-13 > 5833.PFL1655c Length=624 Score = 75.1 bits (183), Expect = 5e-13, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 10/132 (7%) Query 20 WYIISQIQFGEPKDLQLLEAIFAGAISEAGEGSWGVLPAGFVFLGNF-----EVNTKQRK 74 W I+ I P ++LE +F+ ++ + LP GF+ +G+F + N Sbjct 363 WIIMHDIYLDNPSTFEILEKMFSLYVNTYPDNE---LPIGFILMGDFISLKFDYNKNFND 419 Query 75 DIKAGLQDLFNLLL-KYKPLAEHCYFIFVPGPNDPCFAREALPRMPIVSVYTQQFLNLME 133 G + L LL+ K+K + ++CY IF+PG NDPC + ++P+MPI+ Y ++F + Sbjct 420 LYIKGFEKLSVLLISKFKLILQNCYLIFIPGKNDPCACKNSIPKMPILPYYIKKFEQNI- 478 Query 134 QQFKGARDRIFF 145 Q F + +I F Sbjct 479 QSFFSCKKKIIF 490 Lambda K H 0.326 0.141 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22480264135 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40