bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1816_orf1 Length=101 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL1P2.34 77.4 1e-13 > 5833.MAL1P2.34 Length=367 Score = 77.4 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Query 1 NATHLLPRYCSRLQLSMHISDVAEHVAKRAAQVFVSSHRPNSVAAAAIWLVVQLLSSSSA 60 N +HL+ +RLQLS+ + + E+V K+A+ + +SHR NS+ +I L+V+L +++ Sbjct 244 NISHLIYSLSNRLQLSIDLIEAIEYVVKKASTLITTSHRLNSLCGGSIHLIVEL--NTNE 301 Query 61 QQQMLLPKVSEVASVTGAGEHTLRSIYKDMLDVAEHLLP 99 ++ M LP +S++A+V G +TL++ +K++L+ AE+++P Sbjct 302 EKNMKLPNLSQIATVCGVTTNTLKTTFKELLNAAEYIIP 340 Lambda K H 0.317 0.125 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22990353331 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40