bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1796_orf1
Length=208
Score E
Sequences producing significant alignments: (Bits) Value
4932.YGR109W-B 117 2e-25
> 4932.YGR109W-B
Length=1547
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query 4 IAKLSAHGWIGPTYSPICAPRIMVDKRDDGTGERQARMVVNYQALNAPTVVPDFPLPPVQ 63
+ KL + +I P+ SP +P ++V K+D GT R+ V+Y+ LN T+ FPLP +
Sbjct 616 VQKLLDNKFIVPSKSPCSSPVVLVPKKD-GT----FRLCVDYRTLNKATISDPFPLPRID 670
Query 64 TILEMLGGAKYFSTLDLETGFHQIRMAKEDRWKAAFRSVLG------------------- 104
+L +G A+ F+TLDL +G+HQI M +DR+K AF + G
Sbjct 671 NLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFA 730
Query 105 ----------------LDDVLIYSADPPTHVVLLRKVLSIFLTNQFYLKFRKRQFARQEL 148
LDD+LI+S P H L VL +K +K +FA +E
Sbjct 731 RYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEET 790
Query 149 TYLGYTISADGIKPAADKIEAIRVWPEVLENETQVRQSLGTVNYCRMLMGPDYADISRPL 208
+LGY+I I P K AIR +P + Q ++ LG +NY R + P+ + I++P+
Sbjct 791 EFLGYSIGIQKIAPLQHKCAAIRDFP-TPKTVKQAQRFLGMINYYRRFI-PNCSKIAQPI 848
Lambda K H
0.322 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 52674479614
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40