bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1795_orf1
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd2_2320 60.1 2e-08
> 5807.cgd2_2320
Length=1686
Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 0/64 (0%)
Query 14 SVAEPRWIKLKGGKRMNKHRGDILVCFELIRKKDAETLPAYPMRPLVCMCKLSLSCLNVR 73
S EP WIKLKGG R+N H GDIL+C ++++ D++ +P P+ P + ++ ++ ++
Sbjct 687 STLEPFWIKLKGGARLNNHVGDILLCIDIVKLCDSKMVPPQPLFPELKRVQMIVTTTLLQ 746
Query 74 DLIM 77
DL M
Sbjct 747 DLFM 750
Lambda K H
0.325 0.144 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23067334887
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40