bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1769_orf1 Length=165 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0132 76.3 4e-13 > 5833.PF08_0132 Length=1397 Score = 76.3 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 6/164 (3%) Query 1 YFRTAKPSSIADNLQAVIAARALHAVSGTEYFPEIQQIDERTGEVFALSKASLTAKRAAQ 60 +F P I+ + +I A+ S +YFP ++ + +F +++ + Sbjct 71 HFEETSPELISKVVVCIITAKINEQYSSDKYFPTFEETHDNV--IFIITRVFADDNKTRL 128 Query 61 NYKTERKLEQLFLNMGREENKQQMRMQCYRSTQSVFGIDANF-ERLRTYFFQKPDFPYRE 119 NYK E+K+E+ + N + +K R++ +RS SVF + + E LRTY + P Y + Sbjct 129 NYKMEKKIEEKYFNFS-DMSKDCYRLKSFRSVHSVFDKEHTYQEPLRTYILELPT--YND 185 Query 120 EELSPTEKDISKLLDVNFFASKKNTVTASIFQRLNEQLVGDSTG 163 + + E D+ KL+DVNF+ K T + I+ LN+ ++ D TG Sbjct 186 DIIKENETDLKKLMDVNFYNYIKGTRSEQIYYELNKAVLYDLTG 229 Lambda K H 0.317 0.130 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29254071491 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40