bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1657_orf1 Length=147 Score E Sequences producing significant alignments: (Bits) Value 6239.F56C9.5 63.5 2e-09 > 6239.F56C9.5 Length=146 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Query 57 KALDEEFKG--YLRAAEQHKGPNPLSVEQQLAFYGLYKRATAGLCPSKQPSRFNIREYKK 114 K+LDE+F+ ++ A GP S+ QL Y LYK+AT+G C + QP F I + K Sbjct 3 KSLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQRMK 62 Query 115 WEAWRACNSLSALEAKKEYVRRAREL 140 W AW ++ EAK +YV + +L Sbjct 63 WNAWNQLGNMDEAEAKAQYVEKMLKL 88 Lambda K H 0.313 0.125 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23033159460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40