bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1632_orf1 Length=155 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0282 214 4e-55 > 5833.PF14_0282 Length=2657 Score = 214 bits (546), Expect = 4e-55, Method: Composition-based stats. Identities = 94/138 (68%), Positives = 117/138 (84%), Gaps = 0/138 (0%) Query 1 KQQNSSSSYFPDIHQVRKDGVYLYEEFLPTFGTDVKVYTVGPLFAHAEARKSPSVDGVVC 60 K ++ SS Y P+IH+VR +G Y+YEEFL TFGTD+KVYTVG +FAHAEARKSP++DG VC Sbjct 207 KIKDRSSEYCPEIHKVRTNGTYIYEEFLSTFGTDIKVYTVGQMFAHAEARKSPALDGKVC 266 Query 61 RSADGKEIRYPVILTEFEKCIAFKLVRAFKQVVCGFDILRTSRGPFVCDVNGFSFVKSSI 120 R++DGKE+RY VIL+E EK IA+++V AF+Q VCGFDILRT+ GPFVCDVNG+SFVK +I Sbjct 267 RTSDGKEVRYAVILSEAEKIIAYRIVEAFQQTVCGFDILRTTMGPFVCDVNGWSFVKGNI 326 Query 121 KYYEDCSSIIRLYFLNKL 138 KYY DC+ I+R FL KL Sbjct 327 KYYNDCAHILRAMFLAKL 344 Lambda K H 0.325 0.140 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23746592502 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40