bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1618_orf1 Length=120 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_2950 144 5e-34 > 5807.cgd7_2950 Length=405 Score = 144 bits (364), Expect = 5e-34, Method: Composition-based stats. Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 0/116 (0%) Query 5 DGVFDLLHSGHLNALRQARELGCCLVVGINGDEAVLAAKGFLPVYSAAERAEVIASCKWV 64 DGVFDL+H+GH NALR+A++ G LVVGIN D KG P+Y+ ER E++ CKW Sbjct 19 DGVFDLMHAGHFNALRKAKQFGNELVVGINSDLDCFNLKGCYPIYNQDERGELMKGCKWA 78 Query 65 DEVVVGTPYAVSTHLLDALSCEFAAHGDDWVCSSTGEDAYAGPRAAGRMKTFARTE 120 DE+V+GTPY V LL+ L+CEF AHGDD V S G D Y PR GR+K F RTE Sbjct 79 DEIVIGTPYIVEGSLLNQLNCEFVAHGDDLVLCSDGTDPYNEPRILGRLKIFQRTE 134 Lambda K H 0.320 0.134 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23080484097 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40