bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1614_orf1 Length=144 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0224 113 1e-24 > 5833.PF14_0224 Length=959 Score = 113 bits (283), Expect = 1e-24, Method: Composition-based stats. Identities = 60/149 (40%), Positives = 95/149 (63%), Gaps = 7/149 (4%) Query 2 FQKFKDYNEGGDGYLSYEDFVSGIKRLNIDE--EELGFALTDAHLFRVAEAIDLTGSKRI 59 FQKFK+Y+ G+GYL Y DFV IK ++++ +E+ F + D L +A++ID+T S +I Sbjct 784 FQKFKNYDNFGNGYLDYNDFVKAIKNFDMNKISKEVEFEVDDDILMELAKSIDITKSSKI 843 Query 60 NYLEFLQAFHVVDSSSNNNLAEELWGQICATLYQHSNSIRRALHQFDPDLTGKVDSEEFR 119 N+LEFLQAF+VV+ S + +E+W IC +Y++ ++++ + + + GK+ S FR Sbjct 844 NFLEFLQAFYVVN-KSKYSYVDEIWCHICTVIYENKVALKKCMKYLEDTMQGKITSIHFR 902 Query 120 SALVTLNTVLA----RTEAPLTEEQIDLL 144 L+ LN +L PLT+EQIDLL Sbjct 903 YILLELNKILQEHNFEMNKPLTDEQIDLL 931 Lambda K H 0.317 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22567178795 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40