bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1580_orf1 Length=151 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_2480 201 4e-51 > 5807.cgd2_2480 Length=472 Score = 201 bits (512), Expect = 4e-51, Method: Composition-based stats. Identities = 90/145 (62%), Positives = 112/145 (77%), Gaps = 0/145 (0%) Query 1 REAAECHRQVRRYAQSLLRPGLSLTELCNKLEAKTEELIAAAGIERGKGFPTGCSLNECA 60 R AAE HRQVR+Y QS++RP + L ++CN LE+K +EL+AA G++ G GFPTGCSLN CA Sbjct 161 RRAAEVHRQVRKYMQSIIRPEMKLIDMCNILESKVKELVAAEGLKCGWGFPTGCSLNHCA 220 Query 61 AHYTPNPGEDRILGQGDICKLDFGVQVRGRIIDCAFSIAFDPKFDPLIQATKEATNAGLR 120 AHYTPNP + L Q DICKLDFGVQV G IIDCAF++AF+ FDPLIQ+T +ATN GL+ Sbjct 221 AHYTPNPHDFTKLTQDDICKLDFGVQVNGMIIDCAFTVAFNDVFDPLIQSTLDATNTGLK 280 Query 121 AAGVDARLSELGCIIEETINSFEMQ 145 AG+D SE+G IEE I S+E + Sbjct 281 VAGIDVMFSEIGSAIEEVIKSYEFE 305 Lambda K H 0.320 0.137 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22675567716 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40