bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1575_orf1 Length=138 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0315 167 8e-41 > 5833.PF13_0315 Length=509 Score = 167 bits (423), Expect = 8e-41, Method: Composition-based stats. Identities = 82/138 (59%), Positives = 108/138 (78%), Gaps = 1/138 (0%) Query 1 VFQEFGEVREVIIIRDKATAKHKNSAFVKMASISAADSAIKALHNTRVLESAMGPMTVKY 60 +F+E+G V EV+IIRDK T HK+SAFVKMASIS AD+AI+ L+N + L++ +G + VKY Sbjct 104 IFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIRLLNNQKTLDAQLGSLQVKY 163 Query 61 ATGEAERLGLNPQACEPGVPQAKLFVGSLPRSLKEEELKAFFLNYGTVEEVFIMKDSATG 120 A+GE +LG PQ E GV QAKLF+GSLP+++ E+ +K F YGTVEEVFIMKD++TG Sbjct 164 ASGELNKLGF-PQNIESGVDQAKLFIGSLPKNITEDNIKEMFSPYGTVEEVFIMKDNSTG 222 Query 121 QGRGCAFVKMSSKEEAFY 138 G+GC+FVK S KE+A Y Sbjct 223 LGKGCSFVKFSYKEQALY 240 Lambda K H 0.317 0.131 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22344559178 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40