bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1558_orf1 Length=140 Score E Sequences producing significant alignments: (Bits) Value 44689.DDBDRAFT_0189299 72.8 3e-12 > 44689.DDBDRAFT_0189299 Length=1160 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 16/131 (12%) Query 4 ADAVKKGQLVKVKVHAIAGSRLSLTMREVDQATGRDLKP-RNLQ---SGNAAGSRAALFE 59 +D VK+ Q VKVK+ ++A S++SL+M++VDQ+TGRDL P +N+Q S N+ +R+ F+ Sbjct 248 SDVVKRNQQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQSIISTNSTNNRSNPFK 307 Query 60 SLAEEHAQALEKKGLGRITGVKINIESTEEETAYARKRKLMSDYDKWEAQQLQRSGLVSS 119 + + +++ ++ RK ++ D+W +QL SG++S Sbjct 308 PNNNNNNSSNNNN------------NDDDDKYTTSKNRKRIASPDRWGYKQLIASGILSV 355 Query 120 KENPYYDEEAG 130 E P YD+E G Sbjct 356 PEMPNYDKEVG 366 Lambda K H 0.308 0.125 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22914837435 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40