bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1545_orf1 Length=127 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_1070 119 3e-26 > 5807.cgd4_1070 Length=234 Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 1/106 (0%) Query 21 KEQLKLKAEGKIDDDGLDKVVQGSSQNYQIIPLTLPSKANGYEGINAYIDSVGRIKDIPA 80 K Q E K D +++ + S QNY+II L LP+K+N + NAYIDS+GRIK++P Sbjct 56 KLQETFNKESKASDQLVEQAILNS-QNYEIISLVLPNKSNNFTATNAYIDSIGRIKEMPI 114 Query 81 NARASRICSTDIRGDCFLSLVFDDEGIFRRKDFTLKDYERLIKNPP 126 N RAS+ICSTD+RGDCF+S FDDE +F+R F ++Y +L KNPP Sbjct 115 NPRASKICSTDVRGDCFISSSFDDEYVFKRVSFGEEEYNKLCKNPP 160 Lambda K H 0.317 0.138 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22506847341 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40