bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1522_orf1 Length=150 Score E Sequences producing significant alignments: (Bits) Value 3702.AT3G28360.1 183 1e-45 > 3702.AT3G28360.1 Length=1158 Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 89/150 (59%), Positives = 112/150 (74%), Gaps = 1/150 (0%) Query 1 IPAGKCVALVGGSGCGKSTILQLLQRVYDCEQGTVTVSGVPIKEINVKTLRRQMGVVSQE 60 IP+GK VALVGGSG GKST++ LLQR YD +G + + V I + VK LR QMG+VSQE Sbjct 301 IPSGKTVALVGGSGSGKSTVISLLQRFYDPNEGDILIDSVSINNMQVKWLRSQMGMVSQE 360 Query 61 PRLFSATVKQNIELGSPDPVTLEQVVEAAKQANADGFITRFPDGYETDCGAYGGHLSGGQ 120 P LF+ ++K+NI G D + ++VVEAAK +NA FI++FP GY+T G G H+SGGQ Sbjct 361 PSLFATSIKENILFGKEDA-SFDEVVEAAKASNAHNFISQFPHGYQTQVGERGVHMSGGQ 419 Query 121 KQRIAIARALIRRPNILIFDEATSALDSQS 150 KQRIAIARALI+ P IL+ DEATSALD +S Sbjct 420 KQRIAIARALIKSPIILLLDEATSALDLES 449 Lambda K H 0.317 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22764965652 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40