bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1312_orf1
Length=77
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0607 68.9 4e-11
> 5833.PF14_0607
Length=1068
Score = 68.9 bits (167), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 0/73 (0%)
Query 3 CFCQLLVLAWWVQLLRSHPATWLRLSWWGDIAVGVCAFRHFALLKQVLYSSLLALRCGML 62
CFC L++L+ W+ LLR TW +L +G +++ VC F +LK ++Y +++ + G L
Sbjct 790 CFCFLIILSCWIFLLRVDNITWFQLYSYGSLSICVCILVFFFILKYIIYYNVMVTKTGYL 849
Query 63 IDHPLLEKVWRFK 75
ID LLE+VW ++
Sbjct 850 IDTKLLEQVWEYE 862
Lambda K H
0.334 0.142 0.538
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23091434817
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40