bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1279_orf1
Length=212
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE1245w 99.8 5e-20
> 5833.PFE1245w
Length=704
Score = 99.8 bits (247), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/108 (45%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query 101 FYKTKMCDREEGRPCSFPAVCSFAHSPAELRPVYDLTRTRMCPQQQEKGFCSSLRCRYSH 160
FYKTKMC C C FAHS EL P+ DL+ T +CP ++ G C + +C Y+H
Sbjct 24 FYKTKMCPWFFSGRCDRGMECLFAHSQGELNPIPDLSFTSLCPLTKKSGLCKNEKCSYAH 83
Query 161 SPSELRSTSTFYKTQLCIGFQTPSGCRHGEMCRHAHGLKELRPSPAPL 208
S ELR T YKT C F C E CRHAH ++ELRP P L
Sbjct 84 SVCELRPTGDLYKTAPCTKFLR-GKCNAEEHCRHAHFVEELRPLPGNL 130
Lambda K H
0.330 0.140 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 54290949897
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40