bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1268_orf1 Length=203 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.130 224 8e-58 > 5833.MAL13P1.130 Length=303 Score = 224 bits (572), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 107/203 (52%), Positives = 141/203 (69%), Gaps = 0/203 (0%) Query 1 LSLLRFFRCSPESVGKSPLWAAQLACGLFVLGNLTTMAFQSLTDDDSSIKQSRGYRAGTK 60 L +L F R P SVG +P+ + G F++G L M+F LT+DDSSIKQSRGYRAGTK Sbjct 58 LGMLNFLRALPGSVGTAPMPLVLFSIGGFLMGTLLIMSFLQLTEDDSSIKQSRGYRAGTK 117 Query 61 FLQQASSFGVFASTLALLVFYSANYYFDDPWMSKNFGSGSSWLIFFTSRVCDAFALFFYA 120 FL QA+S G + +L+L+ +++YYFDDPWM + G+GSSW+++F+SR+ DAF LF Y Sbjct 118 FLLQATSMGTVSWSLSLICLMASSYYFDDPWMEEKIGAGSSWILYFSSRLIDAFCLFLYG 177 Query 121 GSMFFLETYHSEGAGEAWGWLGAICFKLAAFAEIAALAAWGTSSFEVLDAVYTVMLGVSI 180 FFLE YHSEGAGEAWGWL +CF +F E+ AL + T F LD Y + LG+S+ Sbjct 178 SGCFFLEVYHSEGAGEAWGWLCGMCFIATSFVEVLALTLFNTPLFSSLDWFYCLFLGLSL 237 Query 181 SIAFLWSLFFEPASHRFDVRLTQ 203 + +W L FEP SHR+DV+LTQ Sbjct 238 FFSVIWGLLFEPISHRYDVKLTQ 260 Lambda K H 0.327 0.137 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 49612009869 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40