bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1267_orf2 Length=365 Score E Sequences producing significant alignments: (Bits) Value 5671.LinJ22.0680 119 1e-25 > 5671.LinJ22.0680 Length=487 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 99/255 (38%), Gaps = 11/255 (4%) Query 122 SPQSTQPATT--APATTLPTTQEPT---TEPSSTQPATTQPASTEPSSTEPSSTEPSTTE 176 PQS P + P + P + P P S P + P S P + P S P + Sbjct 58 GPQSVGPLSVDVGPLSVGPQSVGPLSVDVGPLSVGPQSVGPLSVGPQAVGPLSVGPQSVG 117 Query 177 PATTE--PATTGPASTEPATTEPSSTEPASTAPASTEPASTAPASTAPSSTEPASTEPAS 234 P + + P GP S P + P S P S P S P S P S P S S P S Sbjct 118 PLSVDVGPQAVGPQSVGPLSVGPQSVGPLSVGPQSVGPLSVGPLSVGPQSVGSLSVGPQS 177 Query 235 TEPASTEPASTE--PASTAPSSTEPATTEPATTEPATTEPASTAPASTEPASTAPASTAP 292 P S P S + P + P S P P + P + P S P S P S P S P Sbjct 178 VGPLSVGPLSVDVGPQAVGPLSVGPQAVGPLSVGPQSVGPLSVGPQSVGPLSVGPQSVGP 237 Query 293 ASTAPSSTEPASTEPASTEPASTE--PASTEPASTAPSSTEPATTEPATTEPATTEPAST 350 S P S P S P S P S + P S P S P S P + P + P + P S Sbjct 238 LSVGPQSVGPLSVGPQSVGPLSVDVGPQSVGPLSVGPQSVGPLSVGPQSVGPLSVGPQSV 297 Query 351 APASTEPASTAPAST 365 P S P S P S Sbjct 298 GPLSVGPQSVGPLSV 312 Lambda K H 0.296 0.109 0.295 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 140446200012 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40