bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1258_orf2 Length=203 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_4190 323 2e-87 > 5807.cgd6_4190 Length=222 Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 151/202 (74%), Positives = 173/202 (85%), Gaps = 0/202 (0%) Query 1 SRFCRGVPDAKLRIYDVGRKKADVDEFPGVVHLVSDEYEQISSEALEAARVCANKYMIKH 60 SRFCRGVPD K+RIYDVGRKKA+ D FP V+HL+SDEYEQISSEALEAAR+ ANKYMIK Sbjct 20 SRFCRGVPDPKIRIYDVGRKKAECDAFPAVIHLISDEYEQISSEALEAARISANKYMIKF 79 Query 61 CGKDNFHLRMRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPTGLVARVNIGQILMSIR 120 CGKDNFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGA+GKPTG ARVNIGQ+LMSIR Sbjct 80 CGKDNFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAYGKPTGTAARVNIGQVLMSIR 139 Query 121 TKESTVNIASLALRRAAFKFPGRQKVFTSNKWGFTPFTREEYKKWQAEGRIVSDGVCAKW 180 KE A +ALRRA +KFPGRQKV S+KWGFT FT+EEY K+QAEGRIV DGV K+ Sbjct 140 CKEDKTQTAVMALRRAKYKFPGRQKVVVSDKWGFTKFTKEEYLKYQAEGRIVPDGVNCKY 199 Query 181 LAKKGPLSDTFPLAKDIHLPVE 202 ++ +G LS FP A +I++P++ Sbjct 200 ISCRGSLSRIFPEAANINIPLD 221 Lambda K H 0.324 0.137 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 49612009869 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40