bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1184_orf1 Length=288 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0505c 135 1e-30 > 5833.PFL0505c Length=310 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 162/294 (55%), Gaps = 23/294 (7%) Query 2 NIQTIRSNLQSIEANLRNLNRNFVSRRIVESLHDKLKQTFDFILQTEAAFNSWLEEQQQA 61 NI I+ N+ E NL NL N +S+RI+E+LH++++Q + +++TE F W E + A Sbjct 33 NILLIKKNMIYAEENLENLKNNLISKRIIEALHEEIQQIYVKVVETEHLFREW--EIRFA 90 Query 62 EGRQQNTAERQKEKFLFDKLFSHFQSEIRRVQEVSEAVRSAAEKTSLTSSRGLKENEEKE 121 E N E+QK+K++F+KL HF++E+ +++ +S V+ AA + + + N Sbjct 91 E----NPFEKQKKKYIFEKLNIHFKNEVNKLENISINVKKAANELPNIENGEMNYNNNNN 146 Query 122 DKQNKQKEEETQEKYTNIYNHDA---SNLILDMERAGDYEGVEGEDNLFISPETRDMTEF 178 + N + + + I + D +N +LD+++ V +D FI T EF Sbjct 147 NNINGLLNNKKKGNHKFISSDDTMINNNFVLDLDKTY----VNNDD--FIESSTLYDYEF 200 Query 179 DFVSENDALLTRAVAEDRYQGIRRIHAQVSQANHIFKDLANLIFSQGETLNSIETQMQEA 238 D SEND L+ + D+Y+GI++I QV+QA +FKDLANL+F+Q E + + + + Sbjct 201 DQCSENDLLIENEIINDKYEGIKKIQGQVAQAQEVFKDLANLVFTQKENIEMLNNNLYDT 260 Query 239 HAHSKAAAVELRQASK--RQQRSRQRRCF--LVLFIFALSFLILYTLNFFSLFS 288 + ++ +A EL++ +QQR L++FI+ L F I + FSLFS Sbjct 261 NVNTFKSAKELKKTYDHVKQQRFSWFLAVVTLLIFIYFLYFKIFH----FSLFS 310 Lambda K H 0.316 0.129 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 96612488609 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40