bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1182_orf1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT2G39260.1 70.9 1e-11
> 3702.AT2G39260.1
Length=1181
Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
Query 5 LLNRISQATTAQQIDQIAADFFLERLNAKQNRSELIMHILFVAETNVQCMPCCARLLAIL 64
LL R+ + IDQ+ ++ LN+K NR +L+ + V T+++ + +R++A L
Sbjct 470 LLQRLPGCVSRDLIDQLTVEYCY--LNSKTNRKKLVKALFNVPRTSLELLAYYSRMVATL 527
Query 65 RKLLKEETNQALELLQSKWRQLADDCDPTKVEERVRVLRFVCELIKLKLLPPGLLLNCCS 124
+K+ + +++L+ ++ L D +E ++R +RF+ EL K K++P GL+ +C
Sbjct 528 ASCMKDIPSMLVQMLEDEFNSLVHKKDQMNIETKIRNIRFIGELCKFKIVPAGLVFSCLK 587
Query 125 SWLEDFT 131
+ L++FT
Sbjct 588 ACLDEFT 594
Lambda K H
0.326 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22935578866
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40